SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids, 
  product_position_source.position AS position 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
  LEFT JOIN cscart_products_categories AS product_position_source ON cscart_products_categories.product_id = product_position_source.product_id 
  AND product_position_source.category_id = 313 
WHERE 
  cscart_products_categories.product_id IN (
    32313, 32324, 32404, 32327, 32307, 37416, 
    40914, 37313, 32315, 1415, 32314, 3513, 
    49304, 49324, 49300, 49330, 49337, 
    49302, 49281, 49354, 50056, 50222, 
    49840, 49823, 49944, 49831, 49940, 
    50054, 49841, 50053, 49827, 49939
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00250

JSON explain

{
  "query_block": {
    "select_id": 1,
    "nested_loop": [
      {
        "table": {
          "table_name": "cscart_products_categories",
          "access_type": "range",
          "possible_keys": ["PRIMARY", "pt"],
          "key": "pt",
          "key_length": "3",
          "used_key_parts": ["product_id"],
          "rows": 68,
          "filtered": 100,
          "index_condition": "cscart_products_categories.product_id in (32313,32324,32404,32327,32307,37416,40914,37313,32315,1415,32314,3513,49304,49324,49300,49330,49337,49302,49281,49354,50056,50222,49840,49823,49944,49831,49940,50054,49841,50053,49827,49939)"
        }
      },
      {
        "table": {
          "table_name": "cscart_categories",
          "access_type": "eq_ref",
          "possible_keys": ["PRIMARY", "c_status", "p_category_id"],
          "key": "PRIMARY",
          "key_length": "3",
          "used_key_parts": ["category_id"],
          "ref": ["dev_db.cscart_products_categories.category_id"],
          "rows": 1,
          "filtered": 100,
          "attached_condition": "cscart_categories.storefront_id in (0,1) and (cscart_categories.usergroup_ids = '' or find_in_set(0,cscart_categories.usergroup_ids) or find_in_set(1,cscart_categories.usergroup_ids)) and cscart_categories.`status` in ('A','H')"
        }
      },
      {
        "table": {
          "table_name": "product_position_source",
          "access_type": "eq_ref",
          "possible_keys": ["PRIMARY", "pt"],
          "key": "PRIMARY",
          "key_length": "6",
          "used_key_parts": ["category_id", "product_id"],
          "ref": ["const", "dev_db.cscart_products_categories.product_id"],
          "rows": 1,
          "filtered": 100
        }
      }
    ]
  }
}

Result

product_id category_ids position
1415 340,313M 0
3513 313M 0
32307 313,165M 0
32313 313,165M 0
32314 313,165M 0
32315 313,165M 0
32324 313,166M 0
32327 313,165M 0
32404 340,313M 0
37313 313,340M 0
37416 313,166M 0
40914 313,340M 0
49281 313M 0
49300 166,313M 0
49302 166,313M 0
49304 166,313M 0
49324 166,313M 0
49330 166,313M 0
49337 313M 0
49354 313M 0
49823 313M 0
49827 313M 0
49831 313M 0
49840 313M 0
49841 313M 0
49939 313M 0
49940 313M 0
49944 313M 0
50053 313M 0
50054 313M 0
50056 313M 0
50222 313M 0