SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids, 
  product_position_source.position AS position 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
  LEFT JOIN cscart_products_categories AS product_position_source ON cscart_products_categories.product_id = product_position_source.product_id 
  AND product_position_source.category_id = 490 
WHERE 
  cscart_products_categories.product_id IN (
    18201, 40824, 41441, 6099, 49306, 1897, 
    401, 27360, 6058, 41442, 6061, 40761, 
    2471, 6063, 5890, 6062, 41170, 1429, 
    5834, 6057, 47085, 3471, 4280, 27362, 
    31642, 6556, 36399, 5894, 47660, 6056, 
    6561, 4894
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00338

JSON explain

{
  "query_block": {
    "select_id": 1,
    "nested_loop": [
      {
        "table": {
          "table_name": "cscart_products_categories",
          "access_type": "range",
          "possible_keys": ["PRIMARY", "pt"],
          "key": "pt",
          "key_length": "3",
          "used_key_parts": ["product_id"],
          "rows": 53,
          "filtered": 100,
          "index_condition": "cscart_products_categories.product_id in (18201,40824,41441,6099,49306,1897,401,27360,6058,41442,6061,40761,2471,6063,5890,6062,41170,1429,5834,6057,47085,3471,4280,27362,31642,6556,36399,5894,47660,6056,6561,4894)"
        }
      },
      {
        "table": {
          "table_name": "cscart_categories",
          "access_type": "eq_ref",
          "possible_keys": ["PRIMARY", "c_status", "p_category_id"],
          "key": "PRIMARY",
          "key_length": "3",
          "used_key_parts": ["category_id"],
          "ref": ["dev_db.cscart_products_categories.category_id"],
          "rows": 1,
          "filtered": 100,
          "attached_condition": "cscart_categories.storefront_id in (0,1) and (cscart_categories.usergroup_ids = '' or find_in_set(0,cscart_categories.usergroup_ids) or find_in_set(1,cscart_categories.usergroup_ids)) and cscart_categories.`status` in ('A','H')"
        }
      },
      {
        "table": {
          "table_name": "product_position_source",
          "access_type": "eq_ref",
          "possible_keys": ["PRIMARY", "pt"],
          "key": "PRIMARY",
          "key_length": "6",
          "used_key_parts": ["category_id", "product_id"],
          "ref": ["const", "dev_db.cscart_products_categories.product_id"],
          "rows": 1,
          "filtered": 100
        }
      }
    ]
  }
}

Result

product_id category_ids position
401 122M
1429 317,318M
1897 142M
2471 163M
3471 313M
4280 184M
4894 183,209,412,210M
5834 121M
5890 114M
5894 114M
6056 122M
6057 122M
6058 122M
6061 122M
6062 122M
6063 122M
6099 121M
6556 183M
6561 184,183M
18201 122M
27360 409,165M
27362 409,165M
31642 117M
36399 163M
40761 315,119,412,118M
40824 409,184M
41170 118M
41441 154M
41442 154M
47085 210,146M
47660 412,119M
49306 409,209,210,154M