SELECT 
  SQL_CALC_FOUND_ROWS products.product_id, 
  descr1.product as product, 
  companies.company as company_name, 
  products.product_type, 
  products.parent_product_id, 
  cscart_product_review_prepared_data.average_rating average_rating, 
  cscart_product_review_prepared_data.reviews_count product_reviews_count 
FROM 
  cscart_products as products 
  LEFT JOIN cscart_product_descriptions as descr1 ON descr1.product_id = products.product_id 
  AND descr1.lang_code = 'vi' 
  LEFT JOIN cscart_product_prices as prices ON prices.product_id = products.product_id 
  AND prices.lower_limit = 1 
  LEFT JOIN cscart_companies AS companies ON companies.company_id = products.company_id 
  INNER JOIN cscart_products_categories as products_categories ON products_categories.product_id = products.product_id 
  INNER JOIN cscart_categories ON cscart_categories.category_id = products_categories.category_id 
  LEFT JOIN cscart_product_review_prepared_data ON cscart_product_review_prepared_data.product_id = products.product_id 
  AND cscart_product_review_prepared_data.storefront_id = 0 
  LEFT JOIN cscart_product_popularity as popularity ON popularity.product_id = products.product_id 
WHERE 
  1 
  AND companies.status IN ('A') 
  AND (
    products.amount > 0 
    OR products.tracking = 'D'
  ) 
  AND (
    products.usergroup_ids = '' 
    OR FIND_IN_SET(0, products.usergroup_ids) 
    OR FIND_IN_SET(1, products.usergroup_ids)
  ) 
  AND products.status IN ('A') 
  AND prices.usergroup_id IN (0, 0, 1) 
  AND (
    (
      1 
      AND products.product_id IN (
        40310, 2695, 22020, 35175, 47606, 43852, 
        47657, 47902, 48220, 48559, 48652, 
        49009, 49105, 319, 35249, 36305
      )
    ) 
    AND companies.status IN ('A') 
    AND prices.usergroup_id IN (0, 0, 1)
  ) 
GROUP BY 
  products.product_id 
ORDER BY 
  popularity.total desc, 
  products.product_id ASC

Query time 0.00732

JSON explain

{
  "query_block": {
    "select_id": 1,
    "filesort": {
      "sort_key": "popularity.total desc, products.product_id",
      "temporary_table": {
        "nested_loop": [
          {
            "table": {
              "table_name": "products",
              "access_type": "range",
              "possible_keys": ["PRIMARY", "status"],
              "key": "PRIMARY",
              "key_length": "3",
              "used_key_parts": ["product_id"],
              "rows": 16,
              "filtered": 52.06833649,
              "index_condition": "products.product_id in (40310,2695,22020,35175,47606,43852,47657,47902,48220,48559,48652,49009,49105,319,35249,36305)",
              "attached_condition": "(products.amount > 0 or products.tracking = 'D') and (products.usergroup_ids = '' or find_in_set(0,products.usergroup_ids) or find_in_set(1,products.usergroup_ids)) and products.`status` = 'A'"
            }
          },
          {
            "table": {
              "table_name": "descr1",
              "access_type": "eq_ref",
              "possible_keys": ["PRIMARY", "product_id"],
              "key": "PRIMARY",
              "key_length": "11",
              "used_key_parts": ["product_id", "lang_code"],
              "ref": ["dev_db.products.product_id", "const"],
              "rows": 1,
              "filtered": 100,
              "attached_condition": "trigcond(descr1.lang_code = 'vi')"
            }
          },
          {
            "table": {
              "table_name": "companies",
              "access_type": "eq_ref",
              "possible_keys": ["PRIMARY"],
              "key": "PRIMARY",
              "key_length": "4",
              "used_key_parts": ["company_id"],
              "ref": ["dev_db.products.company_id"],
              "rows": 1,
              "filtered": 100,
              "attached_condition": "companies.`status` = 'A'"
            }
          },
          {
            "table": {
              "table_name": "cscart_product_review_prepared_data",
              "access_type": "eq_ref",
              "possible_keys": ["PRIMARY"],
              "key": "PRIMARY",
              "key_length": "7",
              "used_key_parts": ["product_id", "storefront_id"],
              "ref": ["dev_db.products.product_id", "const"],
              "rows": 1,
              "filtered": 100
            }
          },
          {
            "table": {
              "table_name": "popularity",
              "access_type": "eq_ref",
              "possible_keys": ["PRIMARY", "total"],
              "key": "PRIMARY",
              "key_length": "3",
              "used_key_parts": ["product_id"],
              "ref": ["dev_db.products.product_id"],
              "rows": 1,
              "filtered": 100
            }
          },
          {
            "table": {
              "table_name": "prices",
              "access_type": "ref",
              "possible_keys": [
                "usergroup",
                "product_id",
                "lower_limit",
                "usergroup_id"
              ],
              "key": "product_id",
              "key_length": "3",
              "used_key_parts": ["product_id"],
              "ref": ["dev_db.products.product_id"],
              "rows": 1,
              "filtered": 99.9960556,
              "attached_condition": "prices.lower_limit = 1 and prices.usergroup_id in (0,0,1) and prices.usergroup_id in (0,0,1)"
            }
          },
          {
            "table": {
              "table_name": "products_categories",
              "access_type": "ref",
              "possible_keys": ["PRIMARY", "pt"],
              "key": "pt",
              "key_length": "3",
              "used_key_parts": ["product_id"],
              "ref": ["dev_db.products.product_id"],
              "rows": 1,
              "filtered": 100
            }
          },
          {
            "table": {
              "table_name": "cscart_categories",
              "access_type": "eq_ref",
              "possible_keys": ["PRIMARY", "p_category_id"],
              "key": "PRIMARY",
              "key_length": "3",
              "used_key_parts": ["category_id"],
              "ref": ["dev_db.products_categories.category_id"],
              "rows": 1,
              "filtered": 100,
              "using_index": true
            }
          }
        ]
      }
    }
  }
}